| 1957 | Play Phil Sunkel's Jazz Concerto Grosso | Gerry Mulligan & Bob Brookmeyer | | 2 |
| 1957 | Mulligan Meets Monk | Thelonious Monk and Gerry Mulligan | | 14 |
| 1958 | A Profile of Gerry Mulligan | Gerry Mulligan | | 2 |
| 1958 | Reunion With Chet Baker and the Gerry Mulligan Quartet | Gerry Mulligan | | 3 |
| 1958 | The Jazz Combo From "I Want To Live!" | Gerry Mulligan | | 3 |
| 1959 | Gerry Mulligan Meets Ben Webster | Gerry Mulligan & Ben Webster | 4 | 7 |
| 1960 | The Concert Jazz Band | Gerry Mulligan | | 4 |
| 1962 | Two of a Mind | Paul Desmond & Gerry Mulligan | | 8 |
| 1963 | '63: The Concert Jazz Band | Gerry Mulligan | | 2 |
| 1963 | Gerry Mulligan and Annie Ross | Gerry Mulligan & Annie Ross | | 1 |
| 1963 | Jeru | Gerry Mulligan | | 4 |
| 1963 | Night Lights | Gerry Mulligan | 4 | 8 |
| 1964 | Butterfly With Hiccups | Gerry Mulligan | | 1 |
| 1965 | Feelin' Good | Gerry Mulligan | | 1 |
| 1969 | Blues Roots | The Dave Brubeck Trio feat. Gerry Mulligan | 3 | 1 |
| 1972 | The Age of Steam | Gerry Mulligan | | 6 |
| 1974 | Newport Jazz Festival Japan | Joe Newman, Art Farmer, Illinois Jacquet, James Moody, Gerry Mulligan, Jimmy Smith, Kenny Burrell, Jack Six, Roy Haynes | | 1 |
| 1974 | Summit (Reunión cumbre) | Gerry Mulligan & Astor Piazzolla | 4.65 | 11 |
| 1976 | Gerry Mulligan Meets Enrico Intra | Gerry Mulligan | | 1 |
| 1977 | The Arranger | Gerry Mulligan | | 1 |
| 1982 | Meets Johnny Hodges | Gerry Mulligan | | 3 |
| 1983 | Little Big Horn | Gerry Mulligan | | 1 |
| 1984 | Mainstream of Jazz | Gerry Mulligan | 3 | 2 |
| 1985 | Mulligan | Gerry Mulligan | | 1 |
| 1986 | Soft Lights and Sweet Music | Gerry Mulligan meets Scott Hamilton | | 3 |
| 1987 | 1974 | Gerry Mulligan & Astor Piazzolla | | 2 |
| 1988 | Lionel Hampton Presents Gerry Mulligan | Gerry Mulligan | | 1 |
| 1989 | Mulligan Plays Mulligan | Gerry Mulligan | | 1 |
| 1990 | Lonesome Boulevard | Gerry Mulligan | | 1 |
| 1991 | Getz Meets Mulligan in Hi‐Fi | Stan Getz & Gerry Mulligan | 3 | 2 |
| 1991 | Holliday With Mulligan | Judy Holliday & Gerry Mulligan | | 1 |
| 1991 | Saxophone Dreams | Gerry Mulligan | | 1 |
| 1992 | Compact Jazz: Gerry Mulligan | Gerry Mulligan | | 1 |
| 1992 | Re-Birth of the Cool | Gerry Mulligan | | 1 |
| 1992 | Walk on the Water | Gerry Mulligan | | 1 |
| 1993 | Paraiso | Gerry Mulligan with Jane Duboc | | 1 |
| 1993 | Gerry Mulligan Quartet & Chubby Jackson Big Band | Gerry Mulligan & Chet Baker | | 1 |
| 1995 | The Gerry Mulligan Songbook | Gerry Mulligan | | 3 |
| 1996 | Legacy | Gerry Mulligan | | 1 |
| 1997 | The Complete Gerry Mulligan Meets Ben Webster Sessions | Gerry Mulligan & Ben Webster | | 1 |
| 1998 | Mullenium | Gerry Mulligan | | 2 |
| 1998 | Triple Play | Gerry Mulligan | | 1 |
| 2001 | The Saxophone Player | Gerry Mulligan | | 1 |
| 2001 | Toot Toot Tootsie | Sonny Rollins & Gerry Mulligan | | 1 |
| 2002 | I Grandi Del Jazz - Gerry Mulligan - Verve Jazz Masters 36 | Gerry Mulligan | | 1 |
| 2003 | Nights At The Turntable | Chet Baker and Gerry Mulligan | | 1 |
| 2004 | Swing House | Gerry Mulligan & Chet Baker Featuring Lee Konitz | | 1 |
| 2004 | Westwood Walk | Gerry Mulligan | | 1 |
| 2007 | In New York | Gerry Mulligan | | 1 |
| 2008 | Jazz Giants '58 | Stan Getz, Gerry Mulligan, Harry Edison & Louis Bellson and The Oscar Peterson Trio | 5 | 2 |
| 2018 | Getz Meets Mulligan In Hifi | Stan Getz & Gerry Mulligan | 3 | 1 |
| 2020 | Stan Getz and Gerry Mulligan / Stan Getz and the Oscar Peterson Trio | Stan Getz, Gerry Mulligan & The Oscar Peterson Trio | | 1 |
| 2021 | The Rare Albums Collection (CD2) | Gerry Mulligan | | 1 |
| 2024 | Laura | Gerry Mulligan | | 1 |
| — | Briskness | Gerry Mulligan | | 1 |
| — | Gerry Mulligan Meets The Sax Giants Vol. 1 | Gerry Mulligan | | 1 |
| — | Lionel Hampton - Gerry Mulligan | Lionel Hampton & Gerry Mulligan | | 1 |
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